Klebsiella pneumoniae strain EuSCAPE_IT249

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_IT249 is a gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, utilizing chemoheterotrophic energy sources. It is characterized by its mobility, facilitated by the presence of flagella, and typically exists in various arrangements, including chains, pairs, and singles. This strain thrives optimally at 37°C, comfortably fitting within the mesophilic temperature range. As a pathogen, K. pneumoniae strain EuSCAPE_IT249 is associated with a wide array of health complications in humans, including bacteremia, urinary tract infections, pneumonia, and various intra-abdominal infections. It is known to cause severe conditions such as sepsis and neonatal sepsis, as well as pyogenic liver abscesses and emphysematous pyelonephritis. The strain also poses risks in veterinary contexts, affecting hosts such as Gallus gallus (chickens), Sus scrofa (swine), and Canis lupus familiaris (domestic dogs). The ecological role of K. pneumoniae strain EuSCAPE_IT249 is multifaceted, as it is classified as free-living but also significantly impacts human health and agriculture. Its presence in diverse hosts, ranging from mammals to plants, underscores its adaptability and potential for cross-species transmission. This adaptability highlights the need for ongoing surveillance and research to better understand its pathogenic mechanisms and ecological interactions, particularly in the context of rising antibiotic resistance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_IT249

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_IT249
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_IT249 genome assembly,

Gene Summary

Adenine Count

1119815 bp

Thymine Count

1126714 bp

Guanine Count

1504113 bp

Cytosine Count

1524861 bp

Genome Length

5275503 bp

Protein-coding Genes

4837 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding proteinSAMEA3538616_02278Not AvailablePositive2440628 - 244111018263.1
urea abc transporterSAMEA3538616_02279Not AvailableNegative2441146 - 244184425718.4
urea abc transporterSAMEA3538616_02280Not AvailableNegative2441854 - 244265129298.2
urea abc transporterSAMEA3538616_02281Not AvailableNegative2442651 - 244372438703.7
urea abc transporter, permease protein urtbSAMEA3538616_02282Not AvailableNegative2443724 - 244529855861.6
urea abc transporterSAMEA3538616_02283Not AvailableNegative2445360 - 244663146213.2
methionine synthase iiSAMEA3538616_02284Not AvailableNegative2446803 - 244790641335.5
rhodanese-related sulfurtransferaseSAMEA3538616_02285Not AvailableNegative2448055 - 244845314309.1
arac family transcriptional regulatorSAMEA3538616_02286Not AvailablePositive2448521 - 244961839725.5
uncharacterised proteinSAMEA3538616_02287Not AvailablePositive2449584 - 24498028544.45

Displaying genes 2371 – 2380 of 5005 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total