Klebsiella pneumoniae strain EuSCAPE_IT199

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_IT199 is a Gram-negative, rod-shaped bacterium that displays mobility due to the presence of flagella. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. It primarily acts as a chemoheterotroph, deriving its energy from organic compounds. The optimal growth temperature for EuSCAPE_IT199 is around 37°C, which aligns with its habitat as a host-associated organism, often found in association with various species, including Homo sapiens and other animals such as Gallus gallus and Sus scrofa. This strain is notable for its diverse biotic relationships, as it can exist in free-living states while also being pathogenic to humans, causing a range of serious health effects including bacteremia, urinary tract infections, pneumonia, and sepsis. Klebsiella pneumoniae is recognized for its role in both community-acquired and healthcare-associated infections, with implications for public health due to its ability to cause severe illnesses such as neonatal sepsis and pyogenic liver abscesses. With a single replicon and a double membrane structure, EuSCAPE_IT199 is nonsporulating, which contributes to its vulnerability in certain environments where sporulation would provide a survival advantage. The strain's broad host range across various species, including mammals and birds, emphasizes its ecological adaptability and the potential for cross-species transmission, raising concerns regarding the management of infections in both human and veterinary medicine.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_IT199

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_IT199
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_IT199 genome assembly,

Gene Summary

Adenine Count

1294567 bp

Thymine Count

1299994 bp

Guanine Count

1715320 bp

Cytosine Count

1695910 bp

Genome Length

6005791 bp

Protein-coding Genes

5301 genes

Non-Coding Genes

406 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive2132812 - 2132858Not Available
Hypothetical proteinSAMEA3515227_02057Not AvailableNegative2132972 - 213452260292.0
Site-specific integraseSAMEA3515227_02058Not AvailableNegative2134519 - 213554438585.7
Repressor proteinSAMEA3515227_02059Not AvailableNegative2135547 - 213595114825.8
Rha family transcriptional regulatorSAMEA3515227_02060Not AvailablePositive2136335 - 21365417893.57
Regulatory protein ciiSAMEA3515227_02061Not AvailablePositive2136574 - 213708318263.1
Hypothetical proteinSAMEA3515227_02062Not AvailablePositive2137255 - 213759312774.5
Hypothetical proteinSAMEA3515227_02063Not AvailablePositive2137661 - 21378948623.24
Trar/dksa family transcriptional regulatorSAMEA3515227_02064Not AvailablePositive2137894 - 21381218309.07
Dna adenine methylaseSAMEA3515227_02065Not AvailablePositive2138118 - 213896931888.6

Displaying genes 171 – 180 of 5707 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total