Klebsiella pneumoniae strain EuSCAPE_ME005

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_ME005 is a Gram-negative, rod-shaped bacterium that is classified as a facultative anaerobe and a chemoheterotroph. This strain is notable for its ability to thrive in host-associated habitats and exhibits mobility due to the presence of flagella. It typically forms chains, pairs, or exists as single cells. The optimal growth temperature for EuSCAPE_ME005 is 37°C, placing it within the mesophilic temperature range. This strain is characterized by possessing one replicon and two membranes, contributing to its complex cellular structure. Klebsiella pneumoniae strain EuSCAPE_ME005 is associated with numerous health effects, including bacteremia, urinary tract infections, pneumonia, and various types of abscesses, among others. It is known to be pathogenic to humans and can cause severe conditions such as sepsis and neonatal infections. Additionally, it has been implicated in infections across a wide range of hosts, including mammals, birds, and other vertebrates. The free-living biotic relationship of EuSCAPE_ME005 indicates its potential adaptability and ecological versatility, which may facilitate its persistence in diverse environments and hosts. This adaptability, combined with its pathogenic capabilities, underscores the importance of monitoring Klebsiella pneumoniae strains such as EuSCAPE_ME005 in clinical and ecological contexts. Understanding the interactions between this bacterium and its various hosts could provide insights into infection control and prevention strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_ME005

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_ME005
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_ME005 genome assembly,

Gene Summary

Adenine Count

1271670 bp

Thymine Count

1257902 bp

Guanine Count

1612316 bp

Cytosine Count

1691463 bp

Genome Length

5833351 bp

Protein-coding Genes

5335 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Terminase large subunitSAMEA3538547_04977Not AvailableNegative5336600 - 533765839736.4
AttrNot AvailableNot AvailablePositive5336990 - 5337002Not Available
Terminase large subunitSAMEA3538547_05301Not AvailableNegative5639022 - 564068362405.3
Terminase small subunitSAMEA3538547_05302Not AvailableNegative5640667 - 564102313208.6
uncharacterised proteinSAMEA3538547_05303Not AvailableNegative5641154 - 56413066107.4
Head-tail connector proteinSAMEA3538547_05304Not AvailableNegative5641742 - 564203511127.3
Putative head-tail adaptorSAMEA3538547_05305Not AvailableNegative5642028 - 564236612935.6
Portal proteinSAMEA3538547_05306Not AvailableNegative5642363 - 564359846270.8
Putative prohead proteaseSAMEA3538547_05307Not AvailableNegative5643600 - 564416020897.6
Phage major capsid proteinSAMEA3538547_05308Not AvailableNegative5644211 - 564537743056.9

Displaying genes 81 – 90 of 5497 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total