Klebsiella pneumoniae strain EuSCAPE_DE039

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_DE039 is a Gram-negative bacterium that exhibits a rod shape and is classified as a facultative anaerobe. It is capable of existing in various forms, including chains, pairs, and singles. This strain is a chemoheterotroph, utilizing organic compounds for energy, and is known to possess flagella, which contributes to its mobility. The optimal growth temperature for this strain is 37°C, and it thrives in mesophilic conditions. EuSCAPE_DE039 is primarily associated with hosts such as Homo sapiens, Gallus gallus, and various Metazoa, including mammals and birds. Its biotic relationship is categorized as free-living, indicating its ability to survive independently in different environments. The strain has been implicated in a wide range of health effects, including bacteremia, urinary tract infections, pneumonia, and various intra-abdominal infections, among others. These health impacts underscore its pathogenicity in humans, as well as its potential to cause infections in other species, including livestock and pets. This strain’s adaptability to diverse hosts and environments highlights its ecological versatility. The ability to cause infections in both humans and animals suggests that Klebsiella pneumoniae strain EuSCAPE_DE039 may play a significant role in the transmission of bacterial pathogens across species, raising concerns for public health and animal health management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_DE039

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_DE039
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_DE039 genome assembly,

Gene Summary

Adenine Count

1115996 bp

Thymine Count

1126002 bp

Guanine Count

1559681 bp

Cytosine Count

1482994 bp

Genome Length

5284673 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetyltransferaseSAMEA3512066_03527Not AvailablePositive3741461 - 374198820225.1
methylglyoxal reductaseSAMEA3512066_03528Not AvailableNegative3742024 - 374285130745.7
oxidoreductase yqhdSAMEA3512066_03529Not AvailableNegative3742997 - 374416042295.6
putative dna-binding transcriptional regulatorSAMEA3512066_03530Not AvailablePositive3744357 - 374525633714.1
deda family inner membrane protein yghbSAMEA3512066_03531Not AvailableNegative3745306 - 374596524038.4
cystathionine beta-lyaseSAMEA3512066_03532Not AvailableNegative3746097 - 374728443194.7
mota/tolq/exbb proton channel family proteinSAMEA3512066_03533Not AvailablePositive3747535 - 374826625927.6
biopolymer transport protein exbd/tolrSAMEA3512066_03534Not AvailablePositive3748273 - 374869815575.1
gph family transporterSAMEA3512066_03535Not AvailablePositive3748903 - 375032152196.4
putative glycoside hydrolaseSAMEA3512066_03536Not AvailablePositive3750335 - 375185856646.3

Displaying genes 3581 – 3590 of 4984 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total