Klebsiella pneumoniae strain EuSCAPE_IL006

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_IL006 is a pathogenic, Gram-negative bacterium primarily associated with human hosts, though it can also impact a variety of other organisms, including birds and mammals. This strain exhibits a rod shape and can be found in various arrangements, including chains, pairs, and singles. It is classified as a chemoheterotroph, indicating that it derives energy from organic compounds. As a facultative anaerobe, EuSCAPE_IL006 can thrive in both aerobic and anaerobic environments, with an optimal growth temperature of 37°C, characterizing it as mesophilic. The bacterium is motile and possesses flagella, which may aid in its movement within host tissues and environments. The organism has a complex cellular structure, featuring two membranes and a single replicon. Klebsiella pneumoniae strain EuSCAPE_IL006 is associated with a range of serious health effects in humans, including bacteremia, urinary tract infections, pneumonia, and sepsis, among others. These infections can be particularly severe and are often linked to healthcare settings, due to the strain's opportunistic pathogenicity. Ecologically, EuSCAPE_IL006's capacity to inhabit various hosts, from Homo sapiens to a diverse selection of animals and plants, underscores its adaptability and potential role in both environmental and clinical microbiomes. Its pathogenic nature, combined with its broad host range, suggests that this strain may contribute to the dynamics of bacterial populations and infections in both healthcare environments and the natural ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_IL006

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_IL006
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_IL006 genome assembly,

Gene Summary

Adenine Count

1209393 bp

Thymine Count

1207130 bp

Guanine Count

1605176 bp

Cytosine Count

1604151 bp

Genome Length

5625850 bp

Protein-coding Genes

5110 genes

Non-Coding Genes

228 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transposase and inactivated derivativesSAMEA3538464_00346Not AvailableNegative387301 - 38880057454.3
Hypothetical proteinSAMEA3538464_00347Not AvailablePositive388934 - 3891678891.93
Putative tail componentSAMEA3538464_00348Not AvailablePositive389645 - 392617106062.0
Hypothetical proteinSAMEA3538464_00349Not AvailablePositive392638 - 39311118290.8
Hypothetical proteinSAMEA3538464_00350Not AvailablePositive393098 - 39357417364.3
Hypothetical proteinSAMEA3538464_00351Not AvailablePositive393587 - 39396714101.0
Tail proteinSAMEA3538464_00352Not AvailablePositive393964 - 397041111222.0
Tail fiber proteinSAMEA3538464_00353Not AvailablePositive397119 - 39887963375.9
AttrNot AvailableNot AvailablePositive401908 - 401971Not Available
Trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunitSAMEA3538464_03539Not AvailableNegative3812341 - 381335436020.5

Displaying genes 41 – 50 of 5338 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total