Klebsiella pneumoniae strain EuSCAPE_IL001

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_IL001 is a Gram-negative, rod-shaped bacterium that is classified as a chemoheterotroph and exhibits facultative anaerobic respiration. This strain is notable for its mobility, indicated by the presence of flagella, and typically forms chains, pairs, or singles in its cellular arrangement. It thrives optimally at 37°C, consistent with its mesophilic nature, and possesses a biotic relationship characterized as free living. This strain is associated with a wide range of hosts, including Homo sapiens, various species of birds (Phasianidae, Aves), mammals (Canis lupus familiaris, Sus scrofa, Equidae), and aquatic organisms (Danio rerio, Amphibia). Such a diverse host range highlights its ecological versatility and potential for cross-species transmission. Klebsiella pneumoniae strain EuSCAPE_IL001 is recognized for its pathogenicity in humans, being implicated in numerous health issues such as bacteremia, urinary tract infections, pneumonia, sepsis, and liver abscesses, among others. This significant pathogenic profile raises concerns regarding its impact on public health and the importance of monitoring its prevalence in clinical settings. The presence of this strain in various hosts suggests ecological interactions that may facilitate its transmission and persistence in different environments. Understanding the habitat and pathogenic capabilities of Klebsiella pneumoniae strain EuSCAPE_IL001 is crucial for developing effective strategies to control infections and mitigate health risks associated with this versatile bacterium.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_IL001

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_IL001
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_IL001 genome assembly,

Gene Summary

Adenine Count

1186438 bp

Thymine Count

1178066 bp

Guanine Count

1559268 bp

Cytosine Count

1591125 bp

Genome Length

5514897 bp

Protein-coding Genes

4978 genes

Non-Coding Genes

243 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative cii repressorSAMEA3538458_01460Not AvailableNegative1540045 - 154049116777.3
Putative transcriptional regulatorSAMEA3538458_01461Not AvailableNegative1540552 - 15407858294.86
Hypothetical proteinSAMEA3538458_01462Not AvailablePositive1542229 - 154255211967.6
uncharacterised proteinSAMEA3538458_01463Not AvailablePositive1542596 - 154288010734.9
Putative exonucleaseSAMEA3538458_01464Not AvailablePositive1542913 - 154503979038.6
Hypothetical proteinSAMEA3538458_01465Not AvailablePositive1545039 - 154560520124.2
Hypothetical proteinSAMEA3538458_01466Not AvailablePositive1545607 - 15457926890.54
AttrNot AvailableNot AvailablePositive1546430 - 1546441Not Available
Integrase proteinSAMEA3538458_01467Not AvailablePositive1546572 - 154725825768.7
AttlNot AvailableNot AvailablePositive2666244 - 2666258Not Available

Displaying genes 41 – 50 of 5221 in total

Pathways

12 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total