Klebsiella pneumoniae strain EuSCAPE_EE006

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_EE006 is a Gram-negative, rod-shaped bacterium classified as a facultative anaerobe and a chemoheterotroph. This strain is notable for its capacity to exist in various cellular arrangements, including chains, pairs, and singles. It has a mesophilic optimal growth temperature of 37°C and possesses flagella, indicating mobility. K. pneumoniae strain EuSCAPE_EE006 is associated with a wide range of hosts, primarily affecting Homo sapiens and various animal species, including Gallus gallus, Danio rerio, and Sus scrofa, among others. This diverse host range highlights its ecological versatility and potential for zoonotic transmission. The strain is implicated in numerous health complications, including bacteremia, urinary tract infections, pneumonia, and various intra-abdominal infections. These health effects underscore its significance as a human pathogen, particularly in hospital settings, leading to severe conditions such as sepsis and neonatal infections. K. pneumoniae strain EuSCAPE_EE006 is characterized as free-living, with a biotic relationship that allows it to thrive in host-associated environments. Its pathogenicity towards humans is a critical concern, as it can lead to serious medical conditions and complications, particularly in immunocompromised individuals. The presence of only one replicon and two membranes suggests a stable genomic structure, which may contribute to its adaptability and survival in various environments. Understanding the traits and health implications associated with K. pneumoniae strain EuSCAPE_EE006 can inform public health strategies and improve infection control measures in clinical settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_EE006

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_EE006
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_EE006 genome assembly,

Gene Summary

Adenine Count

1199476 bp

Thymine Count

1197552 bp

Guanine Count

1602625 bp

Cytosine Count

1607452 bp

Genome Length

5607105 bp

Protein-coding Genes

5057 genes

Non-Coding Genes

325 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive834773 - 834788Not Available
Hypothetical proteinSAMEA3499910_00825Not AvailableNegative849524 - 8497729172.98
Late control d family proteinSAMEA3499910_00826Not AvailableNegative849817 - 85097142397.0
Tail sheath subtilisin-like domain-containing proteinSAMEA3499910_00827Not AvailablePositive851125 - 85230642927.8
Major tail tube proteinSAMEA3499910_00828Not AvailablePositive852306 - 85282118553.3
Tail proteinSAMEA3499910_00829Not AvailablePositive852876 - 85317510485.4
Tail tape measure proteinSAMEA3499910_00830Not AvailablePositive853335 - 856256101371.0
Tail proteinSAMEA3499910_00831Not AvailablePositive856267 - 85675518285.8
Tail proteinSAMEA3499910_00832Not AvailableNegative856884 - 85804741587.6
uncharacterised proteinSAMEA3499910_00833Not AvailableNegative858127 - 85842610645.6

Displaying genes 1 – 10 of 5382 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
SbpCausesPMC10556727
MasldCausesPMC12853991
Urinary tract infectionsCausesPMC12788680
SepticemiaCausesPMC12788680
Abdominal infectionsCausesPMC12788680
Bacterial pneumoniaCausesPMC12788680
Catheter-associated urinary tract infectionCausesPMC2900259
CautiCausesPMC2900259
CystitisCausesPMC4353729
PneumoniaCausesPMC6315841

Displaying health effects 41 – 50 of 53 in total