Klebsiella pneumoniae strain EuSCAPE_SK015

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_SK015 is a gram-negative, rod-shaped bacterium characterized as a facultative anaerobe and a chemoheterotroph. It typically exists in chains, pairs, or as single cells and is motile, possessing flagella. This strain thrives optimally at a temperature of 37°C, placing it within the mesophilic temperature range. K. pneumoniae strain EuSCAPE_SK015 is associated with various hosts, primarily Homo sapiens, but also includes a diverse range of species such as Gallus gallus, Danio rerio, and Canis lupus familiaris, among others. This broad host range underscores its ecological versatility and potential for cross-species transmission. In terms of health implications, K. pneumoniae strain EuSCAPE_SK015 is known to cause a variety of serious infections in humans, including bacteremia, urinary tract infections, pneumonia, and meningitis. It is also linked to complications such as sepsis and enteritis, making it a significant pathogen in both community and healthcare settings. The presence of this strain in multiple hosts indicates its adaptability and potential role in environmental reservoirs, posing risks for zoonotic transmission and infection. Its ability to thrive in diverse biological environments suggests a complex ecological relationship with numerous organisms, reinforcing the need for surveillance and control measures in managing infections caused by this opportunistic pathogen.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_SK015

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_SK015
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_SK015 genome assembly,

Gene Summary

Adenine Count

1180548 bp

Thymine Count

1183305 bp

Guanine Count

1586138 bp

Cytosine Count

1567070 bp

Genome Length

5517061 bp

Protein-coding Genes

4937 genes

Non-Coding Genes

243 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinSAMEA3500083_04965Not AvailableNegative5315167 - 53154008793.5
5s ribosomal rnaNot AvailableNot AvailablePositive1 - 83Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive11 - 125Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive26 - 1553Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive153 - 267Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive216 - 330Not Available
uncharacterised proteinSAMEA3500083_00001Not AvailableNegative273 - 110630100.7
flagellar biosynthesis, cell-distal portion of basal-body rodSAMEA3500083_00002Not AvailableNegative1114 - 306071378.6
kinaseSAMEA3500083_00003Not AvailableNegative3137 - 6214111504.0
bara-associated response regulator uvry (gaca, sira)SAMEA3500083_00046Not AvailableNegative38740 - 3939623716.0

Displaying genes 181 – 190 of 5180 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total