Klebsiella pneumoniae strain EuSCAPE_FR020

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_FR020 is a Gram-negative, rod-shaped bacterium that exhibits a diverse range of pathogenic effects on multiple hosts, particularly Homo sapiens. As a facultative anaerobe, it can thrive in both aerobic and anaerobic environments, and it is classified as a chemoheterotroph, relying on organic compounds for energy. The strain is capable of mobility due to the presence of flagella and typically forms chains, pairs, or singles. This strain has a mesophilic optimal growth temperature of 37°C, which aligns with the human body temperature, facilitating its role as a significant pathogen. Klebsiella pneumoniae is associated with numerous health complications, including bacteremia, urinary tract infections, pneumonia, and a variety of intra-abdominal infections. These infections can lead to severe conditions such as sepsis and neonatal sepsis, emphasizing the strain's clinical importance. The ecological versatility of Klebsiella pneumoniae EuSCAPE_FR020 is notable, as it has a free-living biotic relationship and can infect a wide range of hosts, including Gallus gallus, Danio rerio, and Sus scrofa, among others. This broad host range may contribute to its persistence in various environments and its potential to adapt to different ecological niches. The presence of a single replicon and two membranes is consistent with its classification as a member of the Enterobacteriaceae family. Understanding the traits of this strain can aid in developing targeted strategies for managing infections it causes, particularly in healthcare settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_FR020

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_FR020
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_FR020 genome assembly,

Gene Summary

Adenine Count

1156993 bp

Thymine Count

1154224 bp

Guanine Count

1545899 bp

Cytosine Count

1552310 bp

Genome Length

5409426 bp

Protein-coding Genes

4987 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive4152414 - 4152425Not Available
Hypothetical proteinSAMEA3500005_03898Not AvailableNegative4152570 - 41528279645.26
Trna,type:thr,anti_codon:tgt;Not AvailableNot AvailablePositive4152895 - 4152970Not Available
Late gene regulator qSAMEA3500005_03900Not AvailableNegative4153162 - 415398330166.3
uncharacterised proteinSAMEA3500005_03901Not AvailableNegative4153980 - 41541024580.58
EndodeoxyribonucleaseSAMEA3500005_03902Not AvailableNegative4154099 - 415445513814.8
Hypothetical proteinSAMEA3500005_03903Not AvailableNegative4154452 - 415475411053.2
Hypothetical proteinSAMEA3500005_03904Not AvailableNegative4154957 - 415555322605.9
Dna pol iii thetaSAMEA3500005_03905Not AvailableNegative4155649 - 41559069939.83
uncharacterised proteinSAMEA3500005_03906Not AvailablePositive4155930 - 41561698781.05

Displaying genes 1 – 10 of 5124 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
MeningitisCausesPMC13168211
Neonatal sepsisCausesPMC13168211
PneumoniaCausesPMC13253921
Urinary tract infectionsCausesPMC13253921
BacteremiaCausesPMC13253921
Neonatal sepsisCausesPMC13253921
Pyogenic liver abscessCausesPMC13253921
MeningitisCausesPMC13253921
Early onset neonatal sepsisCausesPMC4560869
Pyogenic liver abscessCausesPMC7332619

Displaying health effects 21 – 30 of 53 in total