Klebsiella pneumoniae strain EuSCAPE_TR274

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_TR274 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, functioning as a chemoheterotroph. This strain is known for its mobility, facilitated by the presence of flagella, and it typically forms chains, pairs, or single cells. The optimal growth temperature for this mesophilic organism is 37°C, which aligns with the typical human body temperature, emphasizing its adaptation to host-associated environments. EuSCAPE_TR274 has been identified as a pathogen in various hosts, including Homo sapiens, Gallus gallus, and multiple other metazoans, highlighting its versatility and potential zoonotic implications. The strain is associated with a wide range of health effects in humans, including bacteremia, urinary tract infections, pneumonia, and more severe conditions such as sepsis and meningitis. These infections underscore the clinical significance of Klebsiella pneumoniae as a major opportunistic pathogen, particularly in immunocompromised individuals. The ecological insight provided by the biotic relationship of EuSCAPE_TR274 as free-living suggests that it may thrive in diverse environments beyond immediate hosts, potentially contributing to its pathogenicity. The ability to inhabit various hosts and the broad spectrum of infections associated with this strain underscore the importance of monitoring Klebsiella pneumoniae in both clinical and environmental settings to understand its epidemiology and impact on public health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_TR274

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_TR274
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_TR274 genome assembly,

Gene Summary

Adenine Count

1222803 bp

Thymine Count

1229022 bp

Guanine Count

1634685 bp

Cytosine Count

1629017 bp

Genome Length

5715527 bp

Protein-coding Genes

5176 genes

Non-Coding Genes

291 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginine n-succinyltransferaseSAMEA3729871_04430Not AvailableNegative4697453 - 469848738365.9
succinylornithine transaminaseSAMEA3729871_04431Not AvailableNegative4698484 - 469970443493.0
exodeoxyribonuclease iiiSAMEA3729871_04432Not AvailablePositive4700143 - 470094930899.6
deda family inner membrane protein ydjxSAMEA3729871_04433Not AvailablePositive4701163 - 470181923739.5
alkaline phosphataseSAMEA3729871_04434Not AvailablePositive4701806 - 470251625428.5
carboxymuconolactone decarboxylase family proteinSAMEA3729871_04435Not AvailablePositive4702513 - 470307320717.1
abc transporter, periplasmic substrate-binding protein ynjbSAMEA3729871_04436Not AvailablePositive4703076 - 470425443210.4
abc transporter permeaseSAMEA3729871_04437Not AvailablePositive4704227 - 470576254903.7
abc transporter atp-binding proteinSAMEA3729871_04438Not AvailablePositive4705762 - 470639423362.3
thiosulfate sulfurtransferase ynjeSAMEA3729871_04439Not AvailablePositive4706488 - 470779547950.5

Displaying genes 4471 – 4480 of 5467 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total