Klebsiella pneumoniae strain EuSCAPE_IT095

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_IT095 is a Gram-negative, rod-shaped bacterium that belongs to the Enterobacteriaceae family. This strain is categorized as a chemoheterotroph, deriving its energy from organic compounds. It exhibits a facultative anaerobic growth pattern, allowing it to thrive in both aerobic and anaerobic environments. The optimal growth temperature for this strain is 37°C, placing it within the mesophilic temperature range. K. pneumoniae EuSCAPE_IT095 is motile, possessing flagella, and typically presents in a variety of cell arrangements, including chains, pairs, and singles. It has a biotic relationship characterized as free-living. This strain is known to inhabit various hosts, including Homo sapiens (humans), Gallus gallus (chickens), and numerous other metazoan species, indicating its broad ecological adaptability. Clinically, K. pneumoniae EuSCAPE_IT095 is associated with a range of health effects in humans, such as bacteremia, urinary tract infections, pneumonia, and sepsis, among others. These infections highlight its pathogenicity, particularly in human hosts. The presence of this strain in diverse host species suggests a potential ecological role in both environmental and clinical settings, reflecting its capacity to adapt and thrive in varied biological contexts. Understanding the traits and behaviors of K. pneumoniae EuSCAPE_IT095 can provide insights into its impact on health and disease across different organisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_IT095

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_IT095
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_IT095 genome assembly,

Gene Summary

Adenine Count

1142563 bp

Thymine Count

1137373 bp

Guanine Count

1527015 bp

Cytosine Count

1540242 bp

Genome Length

5347193 bp

Protein-coding Genes

4874 genes

Non-Coding Genes

186 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrogen regulatory protein p-iiSAMEA3729930_01557Not AvailableNegative1675247 - 167558512430.2
sensory histidine kinase yfhaSAMEA3729930_01558Not AvailableNegative1675651 - 167698849239.7
alpha helix proteinSAMEA3729930_01559Not AvailableNegative1676975 - 167766125593.0
sensor-like histidine kinase yfhkSAMEA3729930_01560Not AvailableNegative1677691 - 167911252864.9
phosphoribosylformylglycinamidine synthaseSAMEA3729930_01561Not AvailableNegative1679703 - 1683590140879.0
slt family transglycosylaseSAMEA3729930_01562Not AvailablePositive1683766 - 168538261119.3
pp_01542SAMEA3729930_01563Not AvailableNegative1685379 - 1685888Not Available
had superfamily (subfamily if) hydrolase, yfhbSAMEA3729930_01564Not AvailableNegative1685951 - 168658624268.6
sialic acid utilization regulatorSAMEA3729930_01565Not AvailablePositive1686800 - 168764830713.2
4fe-4s ferredoxinSAMEA3729930_01566Not AvailablePositive1687705 - 16879659769.74

Displaying genes 1631 – 1640 of 5060 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total