Klebsiella pneumoniae strain EuSCAPE_TR052

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_TR052 is a Gram-negative, rod-shaped bacterium known for its pathogenicity in humans and various hosts, including mammals and birds. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments, with an optimal growth temperature of 37°C, placing it within the mesophilic category. It exhibits mobility, characterized by the presence of flagella, and typically forms chains, pairs, or singles in its cellular arrangement. As a chemoheterotroph, K. pneumoniae strain EuSCAPE_TR052 derives its energy from organic compounds, which is consistent with its role as a free-living organism associated with various hosts, including Homo sapiens, Gallus gallus, and several other metazoans and plants. This strain is non-sporulating and possesses a single replicon and two membranes. The pathogenic effects of this strain are significant, causing a wide range of infections in humans, such as bacteremia, urinary tract infections, pneumonia, and sepsis, among others. Its ability to infect various hosts suggests a versatility that may contribute to its persistence in diverse environments. From an ecological perspective, the presence of K. pneumoniae strain EuSCAPE_TR052 in multiple host species highlights its potential role in the transmission of antibiotic resistance genes, further complicating treatment options for infections. Understanding its habitat and pathogenicity can help inform public health strategies aimed at controlling its spread and minimizing its impact on both human health and animal populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_TR052

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_TR052
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_TR052 genome assembly,

Gene Summary

Adenine Count

1214079 bp

Thymine Count

1214407 bp

Guanine Count

1609124 bp

Cytosine Count

1600403 bp

Genome Length

5638013 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein yiccSAMEA3729724_02395Not AvailableNegative2487335 - 248819833027.7
putative acetyltransferaseSAMEA3729724_02396Not AvailablePositive2488698 - 249039864610.7
lipoproteinSAMEA3729724_02397Not AvailablePositive2490488 - 249145336036.6
putative abc-type multidrug transport system atpase componentSAMEA3729724_02398Not AvailablePositive2491446 - 249236334622.0
abc transporter permeaseSAMEA3729724_02399Not AvailablePositive2492395 - 249348940121.2
ribonuclease phSAMEA3729724_02400Not AvailablePositive2493586 - 249430225271.4
orotate phosphoribosyltransferaseSAMEA3729724_02401Not AvailablePositive2494413 - 249505423623.4
gluconolactonaseSAMEA3729724_02402Not AvailableNegative2495090 - 249610637609.4
transcriptional regulator slmaSAMEA3729724_02403Not AvailableNegative2496282 - 249687822825.8
deoxyuridine 5'-triphosphate nucleotidohydrolaseSAMEA3729724_02404Not AvailableNegative2497003 - 249746116163.6

Displaying genes 2631 – 2640 of 5428 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total