Klebsiella pneumoniae strain EuSCAPE_TR015

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_TR015 is a Gram-negative, rod-shaped bacterium exhibiting a facultative anaerobic lifestyle. This strain is classified as a chemoheterotroph, utilizing organic compounds for energy, and typically thrives at an optimal temperature of 37°C, which falls within its mesophilic temperature range. The organism is capable of mobility, possessing flagella that enable movement. It is characterized by its cellular arrangement, which can be found in chains, pairs, or as single cells. EuSCAPE_TR015 has two membranes and contains one replicon, indicating its prokaryotic nature. Klebsiella pneumoniae strain EuSCAPE_TR015 is primarily associated with a variety of hosts, including Homo sapiens, Gallus gallus, and several other vertebrates and invertebrates. This bacterium has been linked to numerous health complications in humans, such as bacteremia, urinary tract infections, pneumonia, and various intra-abdominal infections. The pathogenicity of this strain is significant, contributing to conditions like sepsis and neonatal sepsis. Ecologically, Klebsiella pneumoniae strain EuSCAPE_TR015 exists in a free-living state, suggesting it can thrive independently in diverse environments. The wide range of hosts and associated health effects highlights its adaptability and potential impact on both human health and animal populations. This adaptability may facilitate its survival and spread in various ecological niches, underscoring the importance of monitoring such strains in clinical and environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_TR015

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_TR015
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_TR015 genome assembly,

Gene Summary

Adenine Count

1177837 bp

Thymine Count

1171571 bp

Guanine Count

1564284 bp

Cytosine Count

1587759 bp

Genome Length

5501451 bp

Protein-coding Genes

5035 genes

Non-Coding Genes

186 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinSAMEA3729657_03590Not AvailableNegative3837173 - 383755314121.0
Hypothetical proteinSAMEA3729657_03591Not AvailableNegative3837564 - 383804617535.0
AttlNot AvailableNot AvailablePositive3838229 - 3838241Not Available
Tail length tape measure proteinSAMEA3729657_03592Not AvailableNegative3838513 - 384094587056.9
Tail protein gpt-like proteinSAMEA3729657_03593Not AvailableNegative3841437 - 38417009933.05
Tail assembly chaperoneSAMEA3729657_03594Not AvailableNegative3841733 - 384208612560.0
Major tail subunitSAMEA3729657_03595Not AvailableNegative3842130 - 384262117087.8
Gp11SAMEA3729657_03596Not AvailableNegative3842678 - 384304313800.1
Hypothetical proteinSAMEA3729657_03597Not AvailableNegative3843040 - 384357919375.0
Putative head-tail adaptorSAMEA3729657_03598Not AvailableNegative3843572 - 384390412372.8

Displaying genes 21 – 30 of 5221 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total