Klebsiella pneumoniae strain EuSCAPE_TR100

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_TR100 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, primarily relying on chemoheterotrophy for energy. This strain is known for its mobility, facilitated by the presence of flagella, and demonstrates diverse cellular arrangements, including chains, pairs, and singles. EuSCAPE_TR100 thrives optimally at 37°C within a mesophilic temperature range. This bacterium is associated with various hosts, including Homo sapiens, Gallus gallus, and several other metazoan species, indicating its ecological versatility. It is notably free-living, yet it has significant pathogenic potential in humans, contributing to a wide range of serious health issues. These include bacteremia, pneumonia, urinary tract infections, and various intra-abdominal infections, among others. Its pathogenicity is underscored by its ability to cause conditions such as neonatal sepsis and emphysematous pyelonephritis. Klebsiella pneumoniae strain EuSCAPE_TR100 is nonsporulating and possesses two membranes, characteristic of its Gram-negative classification. The strain's genetic information is cataloged under the accession UJQV00000000.1, signifying its identification in microbial databases. In summary, Klebsiella pneumoniae strain EuSCAPE_TR100 exemplifies the complexity of microbial life, particularly its ability to adapt to different hosts while posing significant health risks to humans. Its role in various infections highlights the importance of understanding such pathogens within both clinical and ecological contexts, emphasizing the need for vigilant monitoring and control measures in healthcare settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_TR100

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_TR100
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_TR100 genome assembly,

Gene Summary

Adenine Count

1182345 bp

Thymine Count

1186221 bp

Guanine Count

1584085 bp

Cytosine Count

1586008 bp

Genome Length

5538659 bp

Protein-coding Genes

4994 genes

Non-Coding Genes

288 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type 1 fimbriae anchoring protein fimdSAMEA3729799_02975Not AvailableNegative3155316 - 315788694048.0
fimbrial chaperoneSAMEA3729799_02976Not AvailableNegative3157936 - 315861625285.5
fimbrial proteinSAMEA3729799_02977Not AvailableNegative3158667 - 315920917957.1
uncharacterised proteinSAMEA3729799_02978Not AvailableNegative3160254 - 316111432811.5
secretion atpaseSAMEA3729799_02979Not AvailableNegative3161141 - 316326179199.9
secretion protein hlydSAMEA3729799_02980Not AvailableNegative3163254 - 316454048293.1
transcriptional regulatorSAMEA3729799_02981Not AvailablePositive3164919 - 316549421755.4
kama family proteinSAMEA3729799_02982Not AvailableNegative3165655 - 316668338630.9
translation elongation factor pSAMEA3729799_02983Not AvailablePositive3166725 - 316729120604.5
entericidin aSAMEA3729799_02984Not AvailablePositive3167365 - 31674964434.53

Displaying genes 3131 – 3140 of 5282 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total