Klebsiella pneumoniae strain EuSCAPE_BE085

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_BE085 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic lifestyle, allowing it to thrive in both aerobic and anaerobic environments. This strain is classified as a chemoheterotroph, relying on organic compounds as its energy source. It can be found in various arrangements, including chains, pairs, and singles, and possesses flagella, indicating mobility. EuSCAPE_BE085 is mesophilic, with an optimal growth temperature of 37°C, making it well-suited for colonization in warm-blooded hosts. Its diverse host range includes Homo sapiens, various mammals (e.g., Canis lupus familiaris, Sus scrofa, and Equidae), birds (e.g., Phasianidae and Gallus gallus), amphibians, and even plants (Viridiplantae). This strain is known for its significant pathogenic potential in humans, being associated with a wide array of health complications such as bacteremia, urinary tract infections, pneumonia, and sepsis, among others. The ability to cause such infections underscores its role as a significant opportunistic pathogen, particularly in immunocompromised individuals. Ecologically, the presence of K. pneumoniae strain EuSCAPE_BE085 in various environments and hosts highlights its adaptability and potential for interspecies transmission. This adaptability may facilitate the spread of antibiotic resistance genes, posing challenges in clinical settings and necessitating ongoing surveillance and research to understand its impact on public health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_BE085

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_BE085
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_BE085 genome assembly,

Gene Summary

Adenine Count

1223129 bp

Thymine Count

1224332 bp

Guanine Count

1622143 bp

Cytosine Count

1630150 bp

Genome Length

5699754 bp

Protein-coding Genes

5021 genes

Non-Coding Genes

452 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna (cmo5u34)-methyltransferaseSAMEA3727672_00129Not AvailableNegative146189 - 14693227633.1
inner membrane proteinSAMEA3727672_00130Not AvailableNegative146972 - 14736715050.9
protein of uncharacterised function duf72SAMEA3727672_00131Not AvailableNegative147420 - 14819329160.0
AttlNot AvailableNot AvailablePositive148143 - 148165Not Available
Putative integraseSAMEA3727672_00132Not AvailableNegative148196 - 14945547185.9
Bacteriophage excisionaseSAMEA3727672_00133Not AvailableNegative149498 - 1497439272.2
Hypothetical proteinSAMEA3727672_00134Not AvailableNegative149747 - 1499628346.89
Hypothetical proteinSAMEA3727672_00135Not AvailableNegative149964 - 1501828053.95
Conserved phage proteinSAMEA3727672_00136Not AvailableNegative150179 - 15094927940.6
Dna methylaseSAMEA3727672_00137Not AvailableNegative150946 - 15147319507.0

Displaying genes 1 – 10 of 5473 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
MeningitisCausesPMC6315841
Bloodstream infectionsCausesPMC6315841
Surgical site infectionsCausesPMC6315841

Displaying health effects 51 – 53 of 53 in total