Klebsiella pneumoniae strain EuSCAPE_HR065

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_HR065 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in varying oxygen levels. This strain is classified as a chemoheterotroph, deriving its energy from organic compounds. It typically forms in chains, pairs, or as single cells and possesses flagella, which contribute to its motility. EuSCAPE_HR065 is mesophilic, with an optimal growth temperature of 37°C, which aligns with the typical body temperature of its primary host, Homo sapiens. The strain has a complex biotic relationship, being free-living yet associated with various hosts, including a range of vertebrates such as Gallus gallus (chickens), Sus scrofa (pigs), and Danio rerio (zebrafish), among others. This strain is known for its pathogenicity in humans, capable of causing a variety of serious health conditions, including bacteremia, pneumonia, urinary tract infections, and sepsis. Such infections highlight its role as an opportunistic pathogen, particularly in immunocompromised individuals or those with underlying health issues. The presence of Klebsiella pneumoniae in diverse hosts underlines its ecological versatility and adaptability. Its ability to cause infections across multiple species suggests a potential for zoonotic transmission, necessitating continuous monitoring of its pathogenic strains in both human health and veterinary contexts. Understanding the ecological dynamics of this bacterium can inform public health strategies aimed at controlling its spread and mitigating its health impacts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_HR065

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_HR065
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_HR065 genome assembly,

Gene Summary

Adenine Count

1155745 bp

Thymine Count

1154037 bp

Guanine Count

1556950 bp

Cytosine Count

1550880 bp

Genome Length

5417612 bp

Protein-coding Genes

4946 genes

Non-Coding Genes

229 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Repressor protein ciSAMEA3721097_04334Not AvailablePositive4603419 - 460435434962.0
3-oxoacyl-(acyl-carrier-protein) reductaseSAMEA3721097_04455Not AvailablePositive4728759 - 472952026670.2
deoxyguanosinetriphosphate triphosphohydrolaseSAMEA3721097_04456Not AvailablePositive4729737 - 473126959001.0
AttlNot AvailableNot AvailablePositive4730221 - 4730235Not Available
pfpi family intracellular proteaseSAMEA3721097_04457Not AvailableNegative4731468 - 473195617217.4
IntegraseSAMEA3721097_04458Not AvailablePositive4732213 - 473339444837.3
Hypothetical proteinSAMEA3721097_04459Not AvailableNegative4733375 - 47335667525.16
Hypothetical proteinSAMEA3721097_04460Not AvailableNegative4733577 - 47337235999.22
uncharacterised proteinSAMEA3721097_04461Not AvailableNegative4733796 - 473427517052.8
uncharacterised proteinSAMEA3721097_04462Not AvailableNegative4734272 - 47344847906.28

Displaying genes 111 – 120 of 5175 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total