Klebsiella pneumoniae strain EuSCAPE_HR059

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_HR059 is a Gram-negative, rod-shaped bacterium that exhibits facultative anaerobic metabolism, utilizing a chemoheterotrophic energy source. It is capable of forming chains, pairs, and singles, and possesses flagella, allowing for mobility. This strain thrives optimally at 37°C and falls within the mesophilic temperature range. EuSCAPE_HR059 is primarily host-associated, displaying a free-living biotic relationship. It has a diverse host range, including Homo sapiens, Gallus gallus, and various other vertebrates such as Canis lupus familiaris and Sus scrofa, as well as members of the plant kingdom like Viridiplantae. The strain is notable for its pathogenicity in humans, being implicated in a variety of serious health issues, including bacteremia, urinary tract infections, pneumonia, and sepsis, among others. With a single replicon and a double membrane structure, Klebsiella pneumoniae strain EuSCAPE_HR059 is nonsporulating. The strain's ability to cause a wide spectrum of infections highlights its potential impact on both human health and veterinary medicine. The presence of this bacterium in multiple hosts suggests an ecological versatility and adaptability, contributing to its role as a significant opportunistic pathogen. Its ability to thrive in diverse environments underscores the importance of monitoring and managing Klebsiella pneumoniae in clinical and ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_HR059

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_HR059
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_HR059 genome assembly,

Gene Summary

Adenine Count

1157376 bp

Thymine Count

1154152 bp

Guanine Count

1558639 bp

Cytosine Count

1551778 bp

Genome Length

5421945 bp

Protein-coding Genes

4938 genes

Non-Coding Genes

245 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oligopeptide transport system permease oppbSAMEA3721091_01853Not AvailablePositive1916320 - 191741440151.6
oligopeptide transport system permease oppcSAMEA3721091_01854Not AvailablePositive1917414 - 191843937774.3
abc transporter atp-binding proteinSAMEA3721091_01855Not AvailablePositive1918441 - 192003058438.4
uncharacterised proteinSAMEA3721091_01856Not AvailableNegative1920034 - 192037812545.9
mfs family multidrug transport proteinSAMEA3721091_01857Not AvailableNegative1920710 - 192190643511.9
ribosomal small subunit pseudouridine synthase aSAMEA3721091_01858Not AvailableNegative1921903 - 192262226611.7
dna or rna helicase of superfamily iiSAMEA3721091_01859Not AvailablePositive1922770 - 192452766301.5
50s ribosomal protein l25SAMEA3721091_01860Not AvailablePositive1924664 - 192494810638.8
lysr family transcriptional regulatorSAMEA3721091_01861Not AvailableNegative1925007 - 192589433490.2
putative beta-lactamaseSAMEA3721091_01862Not AvailablePositive1925998 - 192728447331.9

Displaying genes 2021 – 2030 of 5183 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total