Klebsiella pneumoniae strain EuSCAPE_RO043

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_RO043 is a Gram-negative, rod-shaped bacterium known for its pathogenicity in humans. It is a facultative anaerobe capable of thriving in various environments, primarily associated with hosts, including Homo sapiens and several animal species such as Gallus gallus, Sus scrofa, and Canis lupus familiaris. This strain exhibits a mobility feature, characterized by the presence of flagella, and typically arranges itself in chains, pairs, or singles. As a chemoheterotroph, K. pneumoniae utilizes organic compounds as an energy source, with an optimal growth temperature of 37°C, placing it within the mesophilic temperature range. The bacterium possesses a single replicon and two membranes, indicative of its complex cell structure. K. pneumoniae strain EuSCAPE_RO043 is associated with a range of significant health effects, including bacteremia, urinary tract infections, pneumonia, and various intra-abdominal infections. The strain is particularly concerning due to its potential to cause severe conditions like neonatal sepsis and septicemia, as well as infections in immunocompromised individuals. Ecologically, K. pneumoniae can exist as a free-living organism while also forming biotic relationships with a diverse array of hosts. Its ability to cause infections across multiple species highlights the strain's adaptability and pathogenic potential, emphasizing the importance of understanding its ecology and transmission pathways in both human and veterinary contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_RO043

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_RO043
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_RO043 genome assembly,

Gene Summary

Adenine Count

1166768 bp

Thymine Count

1162208 bp

Guanine Count

1570360 bp

Cytosine Count

1559499 bp

Genome Length

5458835 bp

Protein-coding Genes

4983 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail fiberSAMEA3720953_03843Not AvailableNegative4069182 - 407101166773.4
Tail fibers proteinSAMEA3720953_03844Not AvailableNegative4070980 - 407130611773.5
Baseplate j/gp47 family proteinSAMEA3720953_03845Not AvailableNegative4071575 - 407247431950.5
Baseplate assembly proteinSAMEA3720953_03846Not AvailableNegative4072461 - 407282913311.8
Baseplate assembly protein vSAMEA3720953_03847Not AvailableNegative4072826 - 407341020979.5
Virion morphogenesis proteinSAMEA3720953_03848Not AvailableNegative4073410 - 407405124252.2
Tail proteinSAMEA3720953_03849Not AvailableNegative4074048 - 407450617270.7
Hypothetical proteinSAMEA3720953_03850Not AvailableNegative4074651 - 407504613953.7
LysozymeSAMEA3720953_03851Not AvailableNegative4075043 - 407559420529.6
Hypothetical proteinSAMEA3720953_03852Not AvailableNegative4075591 - 407587210748.1

Displaying genes 101 – 110 of 5192 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total