Klebsiella pneumoniae strain EuSCAPE_LU008

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_LU008 is a Gram-negative, rod-shaped bacterium identified as a facultative anaerobe and a chemoheterotroph. This strain typically exhibits a cellular arrangement consisting of chains, pairs, and singles, and it possesses flagella, indicating mobility. It thrives optimally at 37°C and is categorized as mesophilic, with a single replicon and two membranes. This bacterium is primarily host-associated and can be found in a wide range of hosts, including Homo sapiens, various avian species (Gallus gallus, Phasianidae), and other vertebrates like Danio rerio, Ovis aries, and Canis lupus familiaris, among others. Its biotic relationship is classified as free-living, suggesting adaptability to diverse environments. Klebsiella pneumoniae strain EuSCAPE_LU008 is known for its significant health impacts on humans, causing conditions such as bacteremia, urinary tract infections, pneumonia, and various intra-abdominal infections. It is associated with severe outcomes including sepsis and neonatal infections, highlighting its pathogenic nature. The ecological insight from this strain's wide host range and pathogenicity underscores its role in human health as well as its potential to affect various animal species. This adaptability may contribute to its persistence in different environments, posing challenges for infection control and public health management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_LU008

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_LU008
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_LU008 genome assembly,

Gene Summary

Adenine Count

1219844 bp

Thymine Count

1216669 bp

Guanine Count

1616450 bp

Cytosine Count

1622053 bp

Genome Length

5675016 bp

Protein-coding Genes

5099 genes

Non-Coding Genes

291 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive1269037 - 1269048Not Available
Tail fiber proteinSAMEA3672960_01233Not AvailableNegative1279579 - 128133963375.9
Tail proteinSAMEA3672960_01234Not AvailableNegative1281417 - 1284494111222.0
Hypothetical proteinSAMEA3672960_01235Not AvailableNegative1284491 - 128487114101.0
Hypothetical proteinSAMEA3672960_01236Not AvailableNegative1284884 - 128536017364.3
Hypothetical proteinSAMEA3672960_01237Not AvailableNegative1285347 - 128582018290.8
Putative tail componentSAMEA3672960_01238Not AvailableNegative1285841 - 1288813106062.0
Hypothetical proteinSAMEA3672960_01239Not AvailableNegative1289291 - 12895248891.93
transposase and inactivated derivativesSAMEA3672960_01240Not AvailablePositive1289658 - 129115757454.3
Transposase/is proteinSAMEA3672960_01241Not AvailablePositive1291154 - 129190928668.5

Displaying genes 1 – 10 of 5390 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total