Klebsiella pneumoniae strain EuSCAPE_LU005

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_LU005 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, relying on chemoheterotrophic energy sources. This strain typically exists in host-associated habitats and demonstrates mobility due to the presence of flagella. It can be found in various cell arrangements, including chains, pairs, and singles, and it possesses a mesophilic growth profile, with an optimal temperature of 37°C. The strain is nonsporulating and has a singular replicon with a double membrane structure. It has been identified in a wide range of hosts, including Homo sapiens, various birds (Gallus gallus, Phasianidae), mammals (Sus scrofa, Canis lupus familiaris, Equidae), and aquatic species (Danio rerio, Amphibia). Klebsiella pneumoniae strain EuSCAPE_LU005 is associated with numerous health effects primarily in humans, leading to conditions such as bacteremia, urinary tract infections, pneumonia, and sepsis. The strain is particularly noted for its pathogenic potential, causing severe infections that can be life-threatening, including neonatal sepsis and pyogenic liver abscesses. This strain's ability to thrive in multiple hosts and its significant role in various infectious diseases highlight its ecological versatility and public health relevance. Understanding the pathogenic mechanisms of Klebsiella pneumoniae strain EuSCAPE_LU005 is essential for developing strategies to manage and mitigate the infections it causes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_LU005

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_LU005
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_LU005 genome assembly,

Gene Summary

Adenine Count

1206106 bp

Thymine Count

1204540 bp

Guanine Count

1611939 bp

Cytosine Count

1594180 bp

Genome Length

5616765 bp

Protein-coding Genes

5103 genes

Non-Coding Genes

291 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
potassium transporter peripheral membrane proteinSAMEA3672957_05109Not AvailableNegative5386496 - 538787250270.7
ribosomal rna small subunit methyltransferase bSAMEA3672957_05110Not AvailableNegative5387886 - 538918148605.5
methionyl-trna formyltransferaseSAMEA3672957_05111Not AvailableNegative5389234 - 539018134024.1
peptide deformylaseSAMEA3672957_05112Not AvailableNegative5390196 - 539070519357.6
rossmann fold nucleotide-binding protein smfSAMEA3672957_05113Not AvailablePositive5390834 - 539195840482.9
uncharacterized protein conserved in bacteriaSAMEA3672957_05114Not AvailablePositive5391930 - 539240318547.3
dna topoisomerase type ia zn finger domain-containing proteinSAMEA3672957_05115Not AvailablePositive5392430 - 539297220052.3
putative ribosome maturation factorSAMEA3672957_05116Not AvailablePositive5392977 - 539354920717.6
shikimate 5-dehydrogenaseSAMEA3672957_05117Not AvailablePositive5393553 - 539437129098.0
protein of uncharacterised function (duf1488)SAMEA3672957_05118Not AvailablePositive5394368 - 53946259687.25

Displaying genes 5141 – 5150 of 5394 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total