Klebsiella pneumoniae strain EuSCAPE_LU005

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_LU005 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, relying on chemoheterotrophic energy sources. This strain typically exists in host-associated habitats and demonstrates mobility due to the presence of flagella. It can be found in various cell arrangements, including chains, pairs, and singles, and it possesses a mesophilic growth profile, with an optimal temperature of 37°C. The strain is nonsporulating and has a singular replicon with a double membrane structure. It has been identified in a wide range of hosts, including Homo sapiens, various birds (Gallus gallus, Phasianidae), mammals (Sus scrofa, Canis lupus familiaris, Equidae), and aquatic species (Danio rerio, Amphibia). Klebsiella pneumoniae strain EuSCAPE_LU005 is associated with numerous health effects primarily in humans, leading to conditions such as bacteremia, urinary tract infections, pneumonia, and sepsis. The strain is particularly noted for its pathogenic potential, causing severe infections that can be life-threatening, including neonatal sepsis and pyogenic liver abscesses. This strain's ability to thrive in multiple hosts and its significant role in various infectious diseases highlight its ecological versatility and public health relevance. Understanding the pathogenic mechanisms of Klebsiella pneumoniae strain EuSCAPE_LU005 is essential for developing strategies to manage and mitigate the infections it causes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_LU005

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_LU005
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_LU005 genome assembly,

Gene Summary

Adenine Count

1206106 bp

Thymine Count

1204540 bp

Guanine Count

1611939 bp

Cytosine Count

1594180 bp

Genome Length

5616765 bp

Protein-coding Genes

5103 genes

Non-Coding Genes

291 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorSAMEA3672957_03736Not AvailablePositive3986578 - 398748933547.6
cystathionine gamma-lyaseSAMEA3672957_03737Not AvailableNegative3987490 - 398863841671.7
cystathionine beta-synthaseSAMEA3672957_03738Not AvailableNegative3988649 - 399002550003.6
Trna-pheNot AvailableNot AvailablePositive3990421 - 3990496Not Available
inner membrane protein yqgaSAMEA3672957_03740Not AvailableNegative3990602 - 399131524623.6
ornithine decarboxylaseSAMEA3672957_03741Not AvailablePositive3991735 - 399387379589.0
nucleoside permease nupgSAMEA3672957_03742Not AvailableNegative3993917 - 399517046268.7
membrane-bound lytic murein transglycosylase cSAMEA3672957_03743Not AvailableNegative3995362 - 399644740443.1
fe(2+)-trafficking protein yggxSAMEA3672957_03744Not AvailableNegative3996494 - 399676910920.1
adenine dna glycosylaseSAMEA3672957_03745Not AvailableNegative3996798 - 399785639539.7

Displaying genes 3881 – 3890 of 5394 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total