Klebsiella pneumoniae strain EuSCAPE_HR005

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_HR005 is a Gram-negative, rod-shaped bacterium that thrives in host-associated environments, demonstrating a facultative anaerobic metabolism as a chemoheterotroph. This strain typically displays a cellular arrangement in chains, pairs, or singles and possesses flagella, granting it mobility. Its optimal growth temperature is 37°C, placing it within the mesophilic temperature range. K. pneumoniae EuSCAPE_HR005 is known to have significant pathogenic potential in humans and other hosts, including Homo sapiens, Gallus gallus, and various vertebrates. This strain is implicated in a variety of serious health conditions, including bacteremia, urinary tract infections, pneumonia, and a range of intra-abdominal infections. The diversity of its pathogenic effects also extends to conditions like liver abscesses, meningitis, and neonatal sepsis, highlighting its role as an opportunistic pathogen. With a single replicon and a double membrane structure, K. pneumoniae EuSCAPE_HR005 is nonsporulating, which may influence its survival strategies in the presence of environmental stressors. Its ability to infect a wide range of hosts suggests a high level of ecological versatility and adaptability, allowing it to persist in various biological niches. The strain’s relationship with different hosts and its capacity to cause severe infections underscore the importance of monitoring and understanding its epidemiology and resistance mechanisms, especially in clinical settings where it poses a significant threat to human health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_HR005

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_HR005
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_HR005 genome assembly,

Gene Summary

Adenine Count

1169899 bp

Thymine Count

1167841 bp

Guanine Count

1566875 bp

Cytosine Count

1573346 bp

Genome Length

5477961 bp

Protein-coding Genes

4993 genes

Non-Coding Genes

250 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinSAMEA3721074_03534Not AvailableNegative3743536 - 37437277525.16
Hypothetical proteinSAMEA3721074_03535Not AvailableNegative3743738 - 37438845999.22
uncharacterised proteinSAMEA3721074_03536Not AvailableNegative3743957 - 374443617052.8
uncharacterised proteinSAMEA3721074_03537Not AvailableNegative3744433 - 37446457906.28
Hypothetical proteinSAMEA3721074_03538Not AvailableNegative3744642 - 37448668451.26
Hypothetical proteinSAMEA3721074_03539Not AvailableNegative3744856 - 374556327207.8
Hypothetical proteinSAMEA3721074_03540Not AvailableNegative3745572 - 374615021333.6
Putative serine proteaseSAMEA3721074_03541Not AvailableNegative3746195 - 374702230339.4
uncharacterised proteinSAMEA3721074_03542Not AvailableNegative3747019 - 37472136870.96
Hypothetical proteinSAMEA3721074_03543Not AvailableNegative3747210 - 374763516665.2

Displaying genes 51 – 60 of 5243 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total