Klebsiella pneumoniae strain EuSCAPE_DK013

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_DK013 is a gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic lifestyle and is classified as a chemoheterotroph. It demonstrates mobility due to the presence of flagella and can exist in various cell arrangements, including chains, pairs, and singles. The strain is mesophilic, with an optimal growth temperature of 37°C. This bacterium is known to be free-living and associated with a diverse range of hosts, including Homo sapiens, Gallus gallus, and various other Metazoa, Viridiplantae, and domestic animals such as Canis lupus familiaris and Sus scrofa. The broad host range indicates its versatility in colonizing different biological environments. Klebsiella pneumoniae strain EuSCAPE_DK013 is associated with numerous health complications in humans, including bacteremia, urinary tract infections, pneumonia, and a variety of intra-abdominal infections. The strain's pathogenicity is particularly concerning in hospital settings, where it can lead to severe outcomes such as sepsis and neonatal sepsis. The ability of this strain to thrive in multiple host environments highlights its ecological adaptability and potential for transmission across species. Understanding its pathogenic mechanisms and ecological interactions is crucial for developing effective strategies to mitigate the health risks posed by Klebsiella pneumoniae, particularly in clinical settings where it may cause significant morbidity and mortality.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_DK013

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_DK013
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_DK013 genome assembly,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4726 genes

Non-Coding Genes

645 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetr family transcriptional regulatorSAMEA3649809_05313Not AvailablePositive5636059 - 563664321629.4
transposaseSAMEA3649809_05314Not AvailableNegative5637136 - 563790029684.0
transcriptional regulatorSAMEA3649809_05315Not AvailableNegative5638127 - 563843211477.8
chromate transport protein chraSAMEA3649809_05316Not AvailableNegative5638443 - 563964842278.4
protein of uncharacterised function (duf2913)SAMEA3649809_05317Not AvailableNegative5640122 - 564073322715.2
putative cytoplasmic proteinSAMEA3649809_05318Not AvailableNegative5640787 - 564106810413.4
transposase is116/is110/is902 familySAMEA3649809_05319Not AvailableNegative5642323 - 564339940006.4
integrase catalytic subunitSAMEA3649809_05320Not AvailableNegative5643618 - 564420522559.6
isec14 transposase aSAMEA3649809_05321Not AvailableNegative5644253 - 564453710895.9
putative dna binding proteinSAMEA3649809_05322Not AvailableNegative5644741 - 56450199741.8

Displaying genes 5321 – 5330 of 5371 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total