Klebsiella pneumoniae strain EuSCAPE_PT096

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_PT096 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. It is classified as a facultative anaerobe, allowing it to thrive in varying oxygen environments. The bacterium is chemoheterotrophic, deriving its energy from organic compounds. EuSCAPE_PT096 typically exists in a host-associated habitat, and it displays diverse cell arrangements, including chains, pairs, and singles. This strain has a mesophilic optimal temperature of 37°C, indicative of its preference for body temperature environments. It possesses a single replicon and features a double membrane structure, which is characteristic of Gram-negative bacteria. Klebsiella pneumoniae strain EuSCAPE_PT096 is notable for its pathogenicity in humans, where it is associated with a wide range of health effects. These include serious conditions such as bacteremia, urinary tract infections, pneumonia, and sepsis, among others. The strain can also affect various animal hosts, including birds, mammals, and reptiles, indicating its ecological versatility. The diverse biotic relationships of this bacterium as a free-living organism, alongside its ability to infect multiple hosts, underscores its potential as an opportunistic pathogen. This adaptability highlights the importance of understanding Klebsiella pneumoniae in both human health and its broader ecological role, particularly in environments where it may interact with various species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_PT096

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_PT096
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_PT096 genome assembly,

Gene Summary

Adenine Count

1192967 bp

Thymine Count

1197730 bp

Guanine Count

1610785 bp

Cytosine Count

1593682 bp

Genome Length

5595164 bp

Protein-coding Genes

5116 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Lysr family transcriptional regulatorSAMEA3649909_00922Not AvailableNegative984605 - 98548631611.1
putative integral membrane transport proteinSAMEA3649909_00923Not AvailablePositive985662 - 98687940851.7
3-oxoacyl-(acyl-carrier-protein) reductaseSAMEA3649909_00924Not AvailableNegative986876 - 98762525504.6
Lysr family transcriptional regulatorSAMEA3649909_00925Not AvailablePositive987792 - 98869732993.6
Error-prone lesion bypass dna polymerase vSAMEA3649909_00926Not AvailableNegative988704 - 98996947270.1
Protein umudSAMEA3649909_00927Not AvailableNegative989972 - 99039115166.3
Gp22SAMEA3649909_00928Not AvailablePositive990662 - 9909049386.42
heptosyltransferase family proteinSAMEA3649909_00929Not AvailableNegative991075 - 99221443216.7
ybak/prolyl-trna synthetase-associated domain proteinSAMEA3649909_00930Not AvailablePositive992458 - 99295817915.8
inner membrane proteinSAMEA3649909_00931Not AvailablePositive993075 - 99352115337.7

Displaying genes 1 – 10 of 5303 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Pyogenic liver abscessCausesPMC12392612
Pyogenic liver abscessesCausesPMC12392612
Liver abscessesCausesPMC12392612
Urinary tract infectionsCausesPMC12915344
PneumoniaCausesPMC12915344
BacteremiaCausesPMC12915344
Liver abscessesCausesPMC12915344
EndophthalmitisCausesPMC12915344
MeningitisCausesPMC12915344
Bloodstream infectionsCausesPMC13168211

Displaying health effects 11 – 20 of 53 in total