Klebsiella pneumoniae strain EuSCAPE_PT096

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_PT096 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. It is classified as a facultative anaerobe, allowing it to thrive in varying oxygen environments. The bacterium is chemoheterotrophic, deriving its energy from organic compounds. EuSCAPE_PT096 typically exists in a host-associated habitat, and it displays diverse cell arrangements, including chains, pairs, and singles. This strain has a mesophilic optimal temperature of 37°C, indicative of its preference for body temperature environments. It possesses a single replicon and features a double membrane structure, which is characteristic of Gram-negative bacteria. Klebsiella pneumoniae strain EuSCAPE_PT096 is notable for its pathogenicity in humans, where it is associated with a wide range of health effects. These include serious conditions such as bacteremia, urinary tract infections, pneumonia, and sepsis, among others. The strain can also affect various animal hosts, including birds, mammals, and reptiles, indicating its ecological versatility. The diverse biotic relationships of this bacterium as a free-living organism, alongside its ability to infect multiple hosts, underscores its potential as an opportunistic pathogen. This adaptability highlights the importance of understanding Klebsiella pneumoniae in both human health and its broader ecological role, particularly in environments where it may interact with various species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_PT096

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_PT096
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_PT096 genome assembly,

Gene Summary

Adenine Count

1192967 bp

Thymine Count

1197730 bp

Guanine Count

1610785 bp

Cytosine Count

1593682 bp

Genome Length

5595164 bp

Protein-coding Genes

5116 genes

Non-Coding Genes

187 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transthyretin family proteinSAMEA3649909_00293Not AvailablePositive300818 - 30121914719.7
atp-nad/acox kinaseSAMEA3649909_00294Not AvailableNegative301298 - 3014686314.55
citrate synthase (si)SAMEA3649909_00295Not AvailablePositive301978 - 30328247939.4
uncharacterised proteinSAMEA3649909_00296Not AvailableNegative303335 - 30364011583.2
response regulator (activator) in two-component regulatory system wtih uhpbSAMEA3649909_00297Not AvailableNegative303618 - 30428024682.4
fimbrial proteinSAMEA3649909_00298Not AvailablePositive304752 - 30531219723.4
putative pilin chaperoneSAMEA3649909_00299Not AvailablePositive305371 - 30606625374.7
outer membrane proteinSAMEA3649909_00300Not AvailablePositive306077 - 30851288895.0
fimbrial subunitSAMEA3649909_00301Not AvailablePositive308514 - 30953936155.8
putative gnat-family acetyltransferaseSAMEA3649909_00302Not AvailableNegative309562 - 31042833679.1

Displaying genes 421 – 430 of 5303 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total