Klebsiella pneumoniae strain EuSCAPE_ES265

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_ES265 is a gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, utilizing a chemoheterotrophic energy source. This strain is notable for its mobility and the presence of flagella, allowing it to navigate its habitat, which is primarily host-associated. The optimal growth temperature for this mesophilic organism is 37°C. K. pneumoniae strain EuSCAPE_ES265 can exist in various cellular arrangements, including chains, pairs, and singles, contributing to its adaptability in different environments. It has a biotic relationship classified as free-living, indicating its ability to survive independently while also being associated with a wide range of hosts, including Homo sapiens (humans), Gallus gallus (chickens), and various other metazoan species, including mammals and amphibians. The strain is implicated in a multitude of health issues, particularly in humans, where it can cause conditions such as bacteremia, urinary tract infections, pneumonia, and more severe complications such as meningitis and sepsis. These health effects reflect its pathogenicity, particularly in immunocompromised individuals. The presence of a single replicon and a double membrane structure aligns with the typical characteristics of gram-negative bacteria, which are known to exhibit complex interactions with their environments and hosts. The diverse range of potential hosts and associated health impacts underscores the ecological significance of K. pneumoniae strain EuSCAPE_ES265, highlighting its role as both a commensal and a pathogen in various biological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_ES265

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_ES265
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_ES265 genome assembly,

Gene Summary

Adenine Count

1174226 bp

Thymine Count

1165054 bp

Guanine Count

1540468 bp

Cytosine Count

1603455 bp

Genome Length

5483203 bp

Protein-coding Genes

5007 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Smf family proteinSAMEA3649590_01291Not AvailableNegative1419256 - 142021535073.6
uncharacterised proteinSAMEA3649590_01292Not AvailableNegative1420220 - 142079521182.2
uncharacterised proteinSAMEA3649590_01293Not AvailableNegative1421653 - 14219049533.91
uncharacterised proteinSAMEA3649590_01294Not AvailableNegative1421904 - 142236816955.1
Hypothetical proteinSAMEA3649590_01295Not AvailableNegative1422691 - 14228797371.86
Replication endonucleaseSAMEA3649590_01296Not AvailableNegative1423296 - 142394023678.3
Tyrosine-type recombinase/integraseSAMEA3649590_01297Not AvailablePositive1423954 - 142459824798.6
AttrNot AvailableNot AvailablePositive1437824 - 1437835Not Available
AttlNot AvailableNot AvailablePositive2244500 - 2244528Not Available
Tail fiber proteinSAMEA3649590_02071Not AvailableNegative2257099 - 2260452121377.0

Displaying genes 11 – 20 of 5155 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total