Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Shigella flexneri strain 4028STDY6275090
Accession NumberUIPE00000000.1
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase | SAMEA3710568_00137 | Not Available | - | 137429 - 138679 | 45772.4 |
| 23s rrna pseudouridine synthase e | SAMEA3710568_00138 | Not Available | + | 138851 - 139504 | 24951.8 |
| hydrolase, nudix family | SAMEA3710568_00139 | Not Available | + | 139514 - 139975 | 17433.8 |
| putative trna(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the pp-loop atpase domain | SAMEA3710568_00140 | Not Available | + | 140029 - 141135 | 40960.8 |
| protein ycfc | SAMEA3710568_00141 | Not Available | + | 141171 - 141812 | 22895.9 |
| adenylosuccinate lyase | SAMEA3710568_00142 | Not Available | + | 141816 - 143186 | 51546.7 |
| cupin | SAMEA3710568_00166 | Not Available | + | 160291 - 161412 | 42567.2 |
| peptidase t | SAMEA3710568_00167 | Not Available | - | 161461 - 162687 | 44924.1 |
| putrescine/spermidine abc transporter atpase | SAMEA3710568_00168 | Not Available | + | 162937 - 164073 | 43030.8 |
| spermidine/putrescine abc transporter membrane protein | SAMEA3710568_00169 | Not Available | + | 164057 - 164914 | 32210.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
