Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exonuclease, dsdna, atp-dependent | SAMEA3752620_00790 | Not Available | Negative | 862872 - 866015 | 118544.0 |
| exonuclease sbcd | SAMEA3752620_00791 | Not Available | Negative | 866012 - 867214 | 44714.0 |
| phosphate regulon two-component system, response regulator | SAMEA3752620_00792 | Not Available | Positive | 867404 - 868093 | 26435.0 |
| phosphate regulon two-component system, sensor kinase | SAMEA3752620_00793 | Not Available | Positive | 868151 - 869446 | 49647.4 |
| branched chain amino acid transport system ii carrier protein | SAMEA3752620_00794 | Not Available | Positive | 869853 - 871172 | 46211.5 |
| proline-specific permease | SAMEA3752620_00795 | Not Available | Positive | 871248 - 872621 | 50190.7 |
| maltodextrin glucosidase | SAMEA3752620_00796 | Not Available | Positive | 872777 - 874594 | 69287.1 |
| acyl carrier protein phosphodiesterase | SAMEA3752620_00797 | Not Available | Negative | 874599 - 875234 | 25102.8 |
| s-adenosylmethionine--trna ribosyltransferase-isomerase | SAMEA3752620_00798 | Not Available | Positive | 875476 - 876546 | 39435.0 |
| pp_00767 | SAMEA3752620_00799 | Not Available | Positive | 876602 - 877729 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





