Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein | SAMEA3752620_00770 | Not Available | Negative | 845507 - 846664 | 41865.5 |
| putative microcin b17 uptake protein | SAMEA3752620_00771 | Not Available | Positive | 847016 - 848236 | 46443.9 |
| putative lipoprotein | SAMEA3752620_00772 | Not Available | Positive | 848249 - 849343 | 40413.5 |
| inner membrane protein | SAMEA3752620_00773 | Not Available | Negative | 849401 - 849709 | 11425.2 |
| putative membrane protein yaiz | SAMEA3752620_00774 | Not Available | Positive | 849969 - 850181 | 8097.92 |
| d-alanine--d-alanine ligase | SAMEA3752620_00775 | Not Available | Negative | 850205 - 851299 | 39318.0 |
| anti-rssb factor | SAMEA3752620_00776 | Not Available | Positive | 851762 - 852022 | 9966.07 |
| alkaline phosphatase | SAMEA3752620_00777 | Not Available | Positive | 852122 - 853537 | 49413.3 |
| phosphate starvation-inducible protein | SAMEA3752620_00778 | Not Available | Positive | 853656 - 853976 | 11687.2 |
| putative signal transduction protein | SAMEA3752620_00779 | Not Available | Positive | 854092 - 855192 | 40923.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





