Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | SAMEA3752620_00750 | Not Available | Positive | 824651 - 825517 | 31938.3 |
| 2-keto-4-pentenoate hydratase | SAMEA3752620_00751 | Not Available | Positive | 825527 - 826336 | 28876.5 |
| acetaldehyde dehydrogenase | SAMEA3752620_00752 | Not Available | Positive | 826333 - 827283 | 33458.5 |
| 4-hydroxy-2-oxovalerate aldolase | SAMEA3752620_00753 | Not Available | Positive | 827280 - 828293 | 36470.7 |
| transport protein | SAMEA3752620_00754 | Not Available | Positive | 828469 - 829680 | 41569.5 |
| nucleoprotein/polynucleotide-associated enzyme | SAMEA3752620_00755 | Not Available | Positive | 829782 - 830321 | 19923.8 |
| putative esterase | SAMEA3752620_00756 | Not Available | Negative | 830548 - 831381 | 31381.0 |
| alcohol dehydrogenase | SAMEA3752620_00757 | Not Available | Negative | 831473 - 832582 | 39335.2 |
| regulator protein frmr | SAMEA3752620_00758 | Not Available | Negative | 832617 - 832892 | 10318.3 |
| outer membrane protein | SAMEA3752620_00759 | Not Available | Negative | 833077 - 833850 | 29092.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





