Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase large subunit | SAMEA3752620_01526 | Not Available | Negative | 1643779 - 1645881 | 79172.3 |
| Terminase small subunit | SAMEA3752620_01527 | Not Available | Negative | 1645881 - 1646375 | 18395.8 |
| uncharacterised protein | SAMEA3752620_01528 | Not Available | Positive | 1646729 - 1646899 | 6151.35 |
| Hypothetical protein | SAMEA3752620_01529 | Not Available | Negative | 1646929 - 1647135 | 7638.15 |
| Putative envelope protein | SAMEA3752620_01530 | Not Available | Positive | 1647336 - 1647746 | 16257.6 |
| gnsa/gnsb family transcriptional regulator | SAMEA3752620_01531 | Not Available | Negative | 1647898 - 1648071 | 6549.02 |
| Phage-tail assembly-like protein | SAMEA3752620_01533 | Not Available | Negative | 1649322 - 1649819 | 18310.8 |
| Endolysin | SAMEA3752620_01534 | Not Available | Negative | 1649816 - 1650349 | 19663.6 |
| Hypothetical protein | SAMEA3752620_01535 | Not Available | Negative | 1650346 - 1650657 | 12091.3 |
| Holin protein | SAMEA3752620_01536 | Not Available | Negative | 1650662 - 1650868 | 7394.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





