Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter | SAMEA3752620_00597 | Not Available | Positive | 652244 - 654391 | 79153.2 |
| membrane spanning export protein | SAMEA3752620_00598 | Not Available | Positive | 654452 - 655699 | 46456.3 |
| rtx family exoprotein a | SAMEA3752620_00599 | Not Available | Positive | 655898 - 659725 | 130211.0 |
| sigma-70, region 4 | SAMEA3752620_00600 | Not Available | Positive | 659846 - 660328 | 18654.1 |
| transcriptional regulator rcsb | SAMEA3752620_00601 | Not Available | Positive | 660350 - 660859 | 19545.0 |
| transposase | SAMEA3752620_00602 | Not Available | Negative | 661220 - 661684 | 17743.4 |
| putative carbon-nitrogen hydrolase | SAMEA3752620_00603 | Not Available | Negative | 662546 - 663316 | 28999.6 |
| inhibitor of vertebrate lysozyme precursor | SAMEA3752620_00604 | Not Available | Positive | 663470 - 663943 | 16883.3 |
| acyl-coa dehydrogenase | SAMEA3752620_00605 | Not Available | Negative | 663986 - 666430 | 89246.8 |
| phosphoheptose isomerase | SAMEA3752620_00606 | Not Available | Positive | 666670 - 667248 | 20816.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





