Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemagglutinin-related protein | SAMEA3752620_00587 | Not Available | Positive | 639069 - 639446 | 11945.1 |
| uncharacterised protein | SAMEA3752620_00588 | Not Available | Positive | 639483 - 639674 | 6866.08 |
| uncharacterised protein | SAMEA3752620_00589 | Not Available | Positive | 639671 - 639910 | 8707.16 |
| uncharacterised protein | SAMEA3752620_00590 | Not Available | Positive | 639946 - 640188 | 8720.24 |
| transposase | SAMEA3752620_00591 | Not Available | Positive | 640544 - 641446 | 34127.4 |
| adhesin biosynthesis transcription regulatory papb family protein | SAMEA3752620_00592 | Not Available | Negative | 641930 - 642202 | 10511.5 |
| serine protease (autotransporter) | SAMEA3752620_00593 | Not Available | Negative | 642449 - 646564 | 146596.0 |
| putative transposase | SAMEA3752620_00594 | Not Available | Positive | 649488 - 649802 | 11685.3 |
| uncharacterised protein | SAMEA3752620_00595 | Not Available | Positive | 649799 - 650278 | 18722.5 |
| outer membrane efflux protein | SAMEA3752620_00596 | Not Available | Positive | 651059 - 652219 | 43625.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





