Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative amino acid permease | SAMEA3752620_00567 | Not Available | Positive | 621651 - 623009 | 49540.5 |
| inner membrane protein | SAMEA3752620_00568 | Not Available | Positive | 623242 - 624246 | 36188.1 |
| sira family protein | SAMEA3752620_00569 | Not Available | Positive | 624260 - 624487 | 8092.61 |
| exodeoxyribonuclease i | SAMEA3752620_00570 | Not Available | Negative | 624530 - 625957 | 54487.6 |
| penicillin-binding protein 6b | SAMEA3752620_00571 | Not Available | Positive | 626166 - 627332 | 43343.5 |
| dna gyrase inhibitory protein | SAMEA3752620_00572 | Not Available | Positive | 627451 - 627924 | 18062.3 |
| inner membrane protein | SAMEA3752620_00573 | Not Available | Positive | 628122 - 629180 | 39956.7 |
| putative alpha helix protein | SAMEA3752620_00574 | Not Available | Positive | 629352 - 629681 | 12778.5 |
| cp4-44 prophage | SAMEA3752620_00575 | Not Available | Negative | 630579 - 630773 | 6973.23 |
| toxin of the yeev-yeeu toxin-antitoxin system | SAMEA3752620_00576 | Not Available | Negative | 630880 - 631143 | 9555.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





