Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux system subunit mdta | SAMEA3752620_00499 | Not Available | Negative | 547622 - 548869 | 44483.9 |
| von willebrand factor type a domain-containing protein | SAMEA3752620_00503 | Not Available | Positive | 550085 - 550744 | 24125.8 |
| protein | SAMEA3752620_00504 | Not Available | Positive | 550822 - 551502 | 24524.4 |
| putative chaperonin | SAMEA3752620_00505 | Not Available | Positive | 551499 - 553439 | 71156.1 |
| chaperone | SAMEA3752620_00506 | Not Available | Negative | 553452 - 554804 | 49316.1 |
| 3-methyladenine dna glycosylase | SAMEA3752620_00507 | Not Available | Positive | 554938 - 555840 | 32843.1 |
| sensor protein | SAMEA3752620_00508 | Not Available | Negative | 555901 - 559218 | 124033.0 |
| uridine kinase | SAMEA3752620_00509 | Not Available | Positive | 559536 - 560177 | 24354.6 |
| 2'-deoxycytidine 5'-triphosphate deaminase | SAMEA3752620_00510 | Not Available | Positive | 560269 - 560850 | 21252.4 |
| putative outer membrane assembly protein | SAMEA3752620_00511 | Not Available | Positive | 560872 - 562725 | 68966.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





