Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3752620_01505 | Not Available | Positive | 1622533 - 1622766 | 8778.82 |
| Recombinase family protein | SAMEA3752620_01506 | Not Available | Positive | 1623085 - 1623675 | 21821.5 |
| Qin prophage | SAMEA3752620_01508 | Not Available | Negative | 1624348 - 1627308 | 98234.2 |
| Putative lom-like outer membrane protein | SAMEA3752620_01509 | Not Available | Negative | 1627373 - 1627972 | 21797.2 |
| Host specificity protein | SAMEA3752620_01510 | Not Available | Negative | 1628042 - 1631455 | 124402.0 |
| Putative tail component | SAMEA3752620_01511 | Not Available | Negative | 1631516 - 1632034 | 17899.5 |
| Tail fiber component | SAMEA3752620_01512 | Not Available | Negative | 1632061 - 1632660 | 23100.3 |
| Putative minor tail protein | SAMEA3752620_01513 | Not Available | Negative | 1632810 - 1633508 | 25664.9 |
| Putative minor tail protein | SAMEA3752620_01514 | Not Available | Negative | 1633518 - 1633847 | 12530.1 |
| Tail length tape measure protein | SAMEA3752620_01515 | Not Available | Negative | 1633847 - 1636912 | 112070.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





