Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein lrgb-like family | SAMEA3752620_00426 | Not Available | Negative | 466341 - 467036 | 24471.1 |
| putative effector of murein hydrolase lrga | SAMEA3752620_00427 | Not Available | Negative | 467033 - 467431 | 14579.6 |
| lysr family transcriptional regulator | SAMEA3752620_00428 | Not Available | Negative | 467562 - 468470 | 33857.4 |
| major facilitator transporter | SAMEA3752620_00429 | Not Available | Positive | 468597 - 469955 | 48412.6 |
| gentisate 1,2-dioxygenase | SAMEA3752620_00430 | Not Available | Positive | 469967 - 470995 | 38546.4 |
| fumarylacetoacetate hydrolase | SAMEA3752620_00431 | Not Available | Positive | 471011 - 471712 | 25790.6 |
| glutathione-s-transferase | SAMEA3752620_00432 | Not Available | Positive | 471720 - 472364 | 24164.9 |
| salicylate hydroxylase | SAMEA3752620_00433 | Not Available | Positive | 472379 - 473572 | 44012.6 |
| pp_00417 | SAMEA3752620_00434 | Not Available | Positive | 473634 - 474584 | Not Available |
| multidrug resistance outer membrane protein mdtq | SAMEA3752620_00435 | Not Available | Positive | 475279 - 476715 | 52180.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





