Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nucleoside transporter | SAMEA3752620_00406 | Not Available | Positive | 443831 - 445081 | 43381.2 |
| putative pyrimidine kinase | SAMEA3752620_00407 | Not Available | Negative | 445137 - 446225 | 39719.6 |
| endonuclease iv | SAMEA3752620_00408 | Not Available | Negative | 446229 - 447086 | 31453.2 |
| inner membrane protein | SAMEA3752620_00409 | Not Available | Negative | 447160 - 448209 | 36884.3 |
| lysr family transcriptional regulator | SAMEA3752620_00410 | Not Available | Positive | 448308 - 449189 | 32725.7 |
| lysine transporter | SAMEA3752620_00411 | Not Available | Positive | 449394 - 450863 | 53579.0 |
| colicin i tonb-dependent receptor | SAMEA3752620_00412 | Not Available | Positive | 451156 - 451944 | 28686.6 |
| colicin i tonb-dependent receptor | SAMEA3752620_00413 | Not Available | Positive | 452123 - 453136 | 37735.6 |
| putative esterase | SAMEA3752620_00414 | Not Available | Negative | 453168 - 454004 | 31260.8 |
| gtp cyclohydrolase i fole | SAMEA3752620_00415 | Not Available | Positive | 454262 - 454930 | 24832.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





