Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin-type protein | SAMEA3752620_00356 | Not Available | Positive | 394643 - 395137 | 18076.4 |
| napd protein | SAMEA3752620_00357 | Not Available | Positive | 395127 - 395390 | 9473.02 |
| periplasmic nitrate reductase | SAMEA3752620_00358 | Not Available | Positive | 395387 - 397873 | 93077.0 |
| ferredoxin-type protein | SAMEA3752620_00359 | Not Available | Positive | 397880 - 398575 | 24926.1 |
| ferredoxin-type protein naph | SAMEA3752620_00360 | Not Available | Positive | 398562 - 399425 | 31875.3 |
| citrate reductase cytochrome c-type subunit | SAMEA3752620_00361 | Not Available | Positive | 399422 - 399871 | 16297.4 |
| cytochrome c-type protein | SAMEA3752620_00362 | Not Available | Positive | 399881 - 400483 | 23101.8 |
| heme exporter atp-binding protein (cytochrome c-type biogenesis protein) | SAMEA3752620_00363 | Not Available | Positive | 400496 - 401119 | 22941.5 |
| heme exporter protein b | SAMEA3752620_00364 | Not Available | Positive | 401116 - 401778 | 23592.3 |
| heme exporter protein c | SAMEA3752620_00365 | Not Available | Positive | 401820 - 402557 | 27886.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





