Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator rcsb | SAMEA3752620_00345 | Not Available | Negative | 381853 - 382503 | 23672.0 |
| two-component system sensor kinase | SAMEA3752620_00346 | Not Available | Negative | 382520 - 385192 | 100382.0 |
| outer membrane porin protein c | SAMEA3752620_00348 | Not Available | Positive | 385932 - 387059 | 41269.4 |
| thiamine biosynthesis lipoprotein | SAMEA3752620_00349 | Not Available | Positive | 387171 - 388226 | 38522.0 |
| regulatory protein of adaptative response | SAMEA3752620_00350 | Not Available | Positive | 388300 - 389364 | 39251.8 |
| alpha-ketoglutarate-dependent dioxygenase (alkylated dna repair protein) | SAMEA3752620_00351 | Not Available | Positive | 389364 - 390014 | 24076.9 |
| abc transporter atpase/permease | SAMEA3752620_00352 | Not Available | Positive | 390090 - 391733 | 61556.4 |
| malate:quinone oxidoreductase | SAMEA3752620_00353 | Not Available | Positive | 391951 - 393597 | 60219.0 |
| ecotin | SAMEA3752620_00354 | Not Available | Negative | 393747 - 394235 | 18166.0 |
| uncharacterised protein | SAMEA3752620_00355 | Not Available | Negative | 394370 - 394534 | 6251.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





