Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large extracellular alpha-helical protein | SAMEA3752620_00335 | Not Available | Positive | 364488 - 368882 | 162456.0 |
| protein | SAMEA3752620_00336 | Not Available | Positive | 368883 - 370532 | 61449.2 |
| duf2135 family protein, function uncharacterised | SAMEA3752620_00337 | Not Available | Positive | 370537 - 371313 | 28305.2 |
| acetyl-coa acetyltransferase | SAMEA3752620_00338 | Not Available | Negative | 371387 - 372571 | 40317.0 |
| short-chain fatty acid transporter | SAMEA3752620_00339 | Not Available | Negative | 372602 - 373924 | 47548.7 |
| acetate coa-transferase subunit beta | SAMEA3752620_00340 | Not Available | Negative | 373921 - 374571 | 22975.1 |
| acetate coa-transferase subunit alpha | SAMEA3752620_00341 | Not Available | Negative | 374571 - 375233 | 23536.8 |
| acetoacetate metabolism regulator (two-component system response regulator) | SAMEA3752620_00342 | Not Available | Negative | 375429 - 376814 | 52128.5 |
| sensory histidine kinase atos | SAMEA3752620_00343 | Not Available | Negative | 376811 - 378637 | 67784.1 |
| two-component system sensor kinase | SAMEA3752620_00344 | Not Available | Positive | 378804 - 381653 | 106555.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





