Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | SAMEA3752620_00325 | Not Available | Positive | 347998 - 349074 | 40843.6 |
| ph-inducible protein involved in stress response (putative kinase) | SAMEA3752620_00326 | Not Available | Positive | 349277 - 349927 | 25299.5 |
| putative ferredoxin | SAMEA3752620_00327 | Not Available | Negative | 349981 - 350235 | 9275.25 |
| ribonucleotide-diphosphate reductase subunit beta | SAMEA3752620_00328 | Not Available | Negative | 350235 - 351365 | 43519.6 |
| ribonucleoside-diphosphate reductase | SAMEA3752620_00329 | Not Available | Negative | 351511 - 353796 | 85722.9 |
| adhesin | SAMEA3752620_00330 | Not Available | Positive | 354540 - 358250 | 130364.0 |
| 3-demethylubiquinone-9 3-methyltransferase | SAMEA3752620_00331 | Not Available | Negative | 358391 - 359113 | 26543.0 |
| dna gyrase subunit a | SAMEA3752620_00332 | Not Available | Positive | 359260 - 361887 | 97009.4 |
| putative membrane protein yfaa | SAMEA3752620_00333 | Not Available | Positive | 362036 - 363724 | 62613.8 |
| protein | SAMEA3752620_00334 | Not Available | Positive | 363721 - 364344 | 23795.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





