Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | SAMEA3752620_00305 | Not Available | Negative | 327422 - 327808 | 14058.0 |
| inner membrane protein | SAMEA3752620_00306 | Not Available | Negative | 327808 - 328143 | 12166.6 |
| undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase | SAMEA3752620_00307 | Not Available | Negative | 328140 - 329792 | 62526.0 |
| putative polysaccharide deacetylase | SAMEA3752620_00308 | Not Available | Negative | 329792 - 330682 | 33052.6 |
| bifunctional polymyxin resistance protein | SAMEA3752620_00309 | Not Available | Negative | 330679 - 332661 | 74281.1 |
| undecaprenyl phosphate 4-deoxy-4-formamido-l-arabinose transferase | SAMEA3752620_00310 | Not Available | Negative | 332661 - 333629 | 36254.3 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | SAMEA3752620_00311 | Not Available | Negative | 333633 - 334790 | 42277.0 |
| phosphoglycerate mutase | SAMEA3752620_00312 | Not Available | Positive | 335080 - 335682 | 22360.9 |
| nudix-family hydrolase | SAMEA3752620_00313 | Not Available | Negative | 335721 - 336146 | 16371.6 |
| outer membrane porin protein | SAMEA3752620_00314 | Not Available | Positive | 336425 - 336967 | 18596.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





