Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase chain j | SAMEA3752620_00287 | Not Available | Positive | 310260 - 310814 | 19875.9 |
| nadh dehydrogenase i subunit k | SAMEA3752620_00288 | Not Available | Positive | 310811 - 311113 | 10845.8 |
| nadh-quinone oxidoreductase subunit l | SAMEA3752620_00289 | Not Available | Positive | 311110 - 312951 | 66446.1 |
| nadh dehydrogenase i subunit m | SAMEA3752620_00290 | Not Available | Positive | 313182 - 314711 | 56527.9 |
| nadh-quinone oxidoreductase subunit n | SAMEA3752620_00291 | Not Available | Positive | 314718 - 316175 | 52047.3 |
| protein | SAMEA3752620_00292 | Not Available | Negative | 316242 - 316745 | 18975.8 |
| aminopeptidase | SAMEA3752620_00293 | Not Available | Negative | 316848 - 317819 | 35788.7 |
| deubiquitinase | SAMEA3752620_00294 | Not Available | Negative | 317868 - 317984 | 4390.35 |
| ribonuclease bn | SAMEA3752620_00295 | Not Available | Negative | 318175 - 319092 | 32943.6 |
| acetyltransferase | SAMEA3752620_00296 | Not Available | Positive | 319157 - 319618 | 17376.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





