Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine abc transporter, substrate-binding periplasmic protein | SAMEA3752620_00257 | Not Available | Positive | 279356 - 280138 | 28484.9 |
| histidine abc transporter permease | SAMEA3752620_00258 | Not Available | Positive | 280228 - 280914 | 24648.9 |
| histidine transport system permease hism | SAMEA3752620_00259 | Not Available | Positive | 280911 - 281627 | 26871.3 |
| histidine/lysine/arginine/ornithine transporter subunit | SAMEA3752620_00260 | Not Available | Positive | 281635 - 282408 | 28626.8 |
| transposase | SAMEA3752620_00261 | Not Available | Positive | 282605 - 283507 | 34638.0 |
| nad(p)-binding rossmann-fold domain | SAMEA3752620_00262 | Not Available | Negative | 283555 - 284448 | 32697.7 |
| d-erythro-7,8-dihydroneopterin triphosphate epimerase | SAMEA3752620_00263 | Not Available | Negative | 284469 - 284831 | 14082.8 |
| putative glutathione s-transferase | SAMEA3752620_00264 | Not Available | Negative | 284888 - 285535 | 24440.1 |
| putative glutathione s-transferase | SAMEA3752620_00265 | Not Available | Positive | 285671 - 286315 | 24288.9 |
| putative phosphodiesterase | SAMEA3752620_00266 | Not Available | Positive | 286371 - 286922 | 19992.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





