Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber component | SAMEA3752620_00663 | Not Available | Positive | 714874 - 715617 | 28376.4 |
| Tail assembly protein | SAMEA3752620_00664 | Not Available | Positive | 715614 - 716162 | 18925.8 |
| Putative tail tip assembly protein | SAMEA3752620_00665 | Not Available | Positive | 716223 - 719720 | 127155.0 |
| Putative lom-like outer membrane protein | SAMEA3752620_00666 | Not Available | Positive | 719791 - 720390 | 21595.8 |
| Side tail fiber | SAMEA3752620_00667 | Not Available | Positive | 720455 - 723853 | 115164.0 |
| Serine-type dna invertase fin | SAMEA3752620_00669 | Not Available | Positive | 724623 - 724778 | 6043.13 |
| cp4-57 prophage | SAMEA3752620_00670 | Not Available | Positive | 724838 - 725908 | 40465.7 |
| cp4-57 prophage protein | SAMEA3752620_00671 | Not Available | Positive | 725901 - 726263 | 13305.0 |
| Transposase is1 | SAMEA3752620_00672 | Not Available | Positive | 726566 - 726841 | 9902.97 |
| Transposase is1 | SAMEA3752620_00673 | Not Available | Positive | 726886 - 727263 | 14985.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





