Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna-binding protein | SAMEA3752620_04959 | Not Available | Positive | 5101046 - 5101576 | 20034.9 |
| pilin precursor | SAMEA3752620_04960 | Not Available | Negative | 5102899 - 5103174 | 9565.96 |
| conjugal transfer protein tray | SAMEA3752620_04961 | Not Available | Negative | 5103207 - 5103602 | 15184.2 |
| conjugal transfer transcriptional regulator traj | SAMEA3752620_04962 | Not Available | Negative | 5103701 - 5104390 | 27063.2 |
| conjugal transfer protein tram | SAMEA3752620_04963 | Not Available | Negative | 5104577 - 5104960 | 14518.3 |
| uncharacterised protein | SAMEA3752620_04964 | Not Available | Positive | 5106199 - 5106696 | 19101.2 |
| relaxosome component | SAMEA3752620_04965 | Not Available | Negative | 5106730 - 5107155 | 16774.8 |
| putative transposase orf 1, is66 family | SAMEA3752620_04966 | Not Available | Negative | 5108059 - 5109597 | 57641.9 |
| prophage cp-933o is protein | SAMEA3752620_04967 | Not Available | Negative | 5109646 - 5109993 | 12797.9 |
| putative transposase | SAMEA3752620_04968 | Not Available | Negative | 5109990 - 5110394 | 15255.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





