Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_04663 | SAMEA3752620_04914 | Not Available | Positive | 5060997 - 5062103 | Not Available |
| putative lysogenization regulator | SAMEA3752620_04915 | Not Available | Positive | 5062139 - 5062780 | 22849.9 |
| adenylosuccinate lyase | SAMEA3752620_04916 | Not Available | Positive | 5062784 - 5064154 | 51545.7 |
| colicin-e1 protein | SAMEA3752620_04917 | Not Available | Positive | 5064412 - 5064885 | 16944.8 |
| replication protein | SAMEA3752620_04918 | Not Available | Positive | 5065686 - 5066705 | 38495.6 |
| uncharacterised protein | SAMEA3752620_04919 | Not Available | Negative | 5066966 - 5067364 | 15333.6 |
| replication protein | SAMEA3752620_04920 | Not Available | Positive | 5067541 - 5068467 | 36379.4 |
| uncharacterised protein | SAMEA3752620_04921 | Not Available | Positive | 5068470 - 5069003 | 19841.8 |
| regulatory protein rop | SAMEA3752620_04922 | Not Available | Negative | 5070517 - 5070708 | 7202.34 |
| mobilization protein mobc | SAMEA3752620_04923 | Not Available | Positive | 5070756 - 5071094 | 12687.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





