Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | SAMEA3752620_04902 | Not Available | Positive | 5052180 - 5052383 | 7298.36 |
| conserved putative protein | SAMEA3752620_04903 | Not Available | Positive | 5052439 - 5052672 | 9208.91 |
| parb-like nuclease | SAMEA3752620_04904 | Not Available | Positive | 5052731 - 5054695 | 72018.5 |
| plasmid sos inhibition protein b | SAMEA3752620_04905 | Not Available | Positive | 5054764 - 5055198 | 15833.6 |
| plasmid sos inhibition protein a | SAMEA3752620_04906 | Not Available | Positive | 5055195 - 5055914 | 27741.0 |
| uncharacterised protein | SAMEA3752620_04908 | Not Available | Positive | 5057274 - 5057561 | 11007.2 |
| yubp | SAMEA3752620_04909 | Not Available | Positive | 5057680 - 5058222 | 20253.2 |
| isocitrate dehydrogenase | SAMEA3752620_04911 | Not Available | Negative | 5058397 - 5059647 | 45772.4 |
| ribosomal large subunit pseudouridine synthase e (rrna pseudouridylate synthase e) | SAMEA3752620_04912 | Not Available | Positive | 5059819 - 5060472 | 24881.8 |
| putative nudix-family hydrolase | SAMEA3752620_04913 | Not Available | Positive | 5060482 - 5060943 | 17433.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





