Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA3752620_04880 | Not Available | Positive | 5031626 - 5031838 | 8205.17 |
| uncharacterised protein | SAMEA3752620_04881 | Not Available | Positive | 5032249 - 5032590 | 12103.5 |
| transposase | SAMEA3752620_04882 | Not Available | Positive | 5032894 - 5033892 | 38317.6 |
| papx protein | SAMEA3752620_04883 | Not Available | Negative | 5034205 - 5034705 | 19467.4 |
| is2 insertion element transposase insab' | SAMEA3752620_04884 | Not Available | Negative | 5035001 - 5035543 | 20348.7 |
| putative colicin lysis protein | SAMEA3752620_04886 | Not Available | Negative | 5036162 - 5036299 | 4828.97 |
| colicin-e1 immunity protein | SAMEA3752620_04887 | Not Available | Positive | 5036347 - 5036688 | 13287.8 |
| colicin-e1 protein | SAMEA3752620_04888 | Not Available | Negative | 5036685 - 5038253 | 57238.9 |
| entry exclusion protein 1 | SAMEA3752620_04889 | Not Available | Positive | 5038513 - 5038950 | 17432.6 |
| putative lipoprotein | SAMEA3752620_04890 | Not Available | Positive | 5039031 - 5039450 | 15757.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





